Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cfap53Q9D439 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Gm37714-201ENSMUST00000194742 342 ntBASIC15.26■□□□□ 0.03
Cfap53Q9D439 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.26■□□□□ 0.03
Cfap53Q9D439 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Gm5867-201ENSMUST00000063197 592 ntBASIC15.26■□□□□ 0.03
Cfap53Q9D439 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.26■□□□□ 0.03
Cfap53Q9D439 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.25■□□□□ 0.03
Cfap53Q9D439 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.25■□□□□ 0.03
Cfap53Q9D439 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.25■□□□□ 0.03
Cfap53Q9D439 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.25■□□□□ 0.03
Cfap53Q9D439 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Gm46209-201ENSMUST00000217912 553 ntBASIC15.25■□□□□ 0.03
Cfap53Q9D439 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.25■□□□□ 0.03
Cfap53Q9D439 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cfap53Q9D439 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Gm14767-201ENSMUST00000121559 586 ntBASIC15.24■□□□□ 0.03
Cfap53Q9D439 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.24■□□□□ 0.03
Cfap53Q9D439 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Gm9229-201ENSMUST00000222777 126 ntBASIC15.24■□□□□ 0.03
Cfap53Q9D439 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.24■□□□□ 0.03
Cfap53Q9D439 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cfap53Q9D439 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms