Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.3□□□□□ -0.12
Snf8Q9CZ28 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Snf8Q9CZ28 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Gm2810-201ENSMUST00000118681 990 ntBASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Mir8117-201ENSMUST00000184773 107 ntBASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.29□□□□□ -0.12
Snf8Q9CZ28 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Gm11025-201ENSMUST00000140773 466 ntBASIC14.28□□□□□ -0.12
Snf8Q9CZ28 AA543401-201ENSMUST00000164248 1269 ntBASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Gm27525-201ENSMUST00000184465 107 ntBASIC14.28□□□□□ -0.12
Snf8Q9CZ28 BC001981-202ENSMUST00000191393 1545 ntBASIC14.28□□□□□ -0.12
Snf8Q9CZ28 AA619741-201ENSMUST00000195095 646 ntBASIC14.28□□□□□ -0.12
Snf8Q9CZ28 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snf8Q9CZ28 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snf8Q9CZ28 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Gm11779-201ENSMUST00000118541 368 ntBASIC14.27□□□□□ -0.13
Snf8Q9CZ28 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.27□□□□□ -0.13
Snf8Q9CZ28 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms