Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Gm5864-201ENSMUST00000202263 970 ntBASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.79□□□□□ -0.2
Ssu72Q9CY97 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Gm15427-201ENSMUST00000117288 531 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Gm6443-201ENSMUST00000203599 874 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Gm18195-201ENSMUST00000207604 706 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Gm18027-201ENSMUST00000218947 619 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ssu72Q9CY97 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ssu72Q9CY97 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ssu72Q9CY97 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ssu72Q9CY97 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ssu72Q9CY97 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ssu72Q9CY97 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ssu72Q9CY97 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ssu72Q9CY97 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms