Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cdk9Q99J95 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Cdk9Q99J95 Gm37133-201ENSMUST00000192705 1922 ntBASIC14□□□□□ -0.17
Cdk9Q99J95 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14□□□□□ -0.17
Cdk9Q99J95 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14□□□□□ -0.17
Cdk9Q99J95 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14□□□□□ -0.17
Cdk9Q99J95 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14□□□□□ -0.17
Cdk9Q99J95 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14□□□□□ -0.17
Cdk9Q99J95 AC084391.1-201ENSMUST00000200651 141 ntBASIC14□□□□□ -0.17
Cdk9Q99J95 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14□□□□□ -0.17
Cdk9Q99J95 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdk9Q99J95 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Cdk9Q99J95 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Cdk9Q99J95 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk9Q99J95 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Gm37230-201ENSMUST00000194491 818 ntBASIC13.99□□□□□ -0.17
Cdk9Q99J95 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.99□□□□□ -0.17
Cdk9Q99J95 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.99□□□□□ -0.17
Cdk9Q99J95 Gm45098-201ENSMUST00000207179 657 ntBASIC13.99□□□□□ -0.17
Cdk9Q99J95 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk9Q99J95 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.98□□□□□ -0.17
Cdk9Q99J95 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Gm14140-201ENSMUST00000119999 995 ntBASIC13.98□□□□□ -0.17
Cdk9Q99J95 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.98□□□□□ -0.17
Cdk9Q99J95 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.98□□□□□ -0.17
Cdk9Q99J95 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.98□□□□□ -0.17
Cdk9Q99J95 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.98□□□□□ -0.17
Cdk9Q99J95 Gm10154-201ENSMUST00000084445 354 ntBASIC13.98□□□□□ -0.17
Cdk9Q99J95 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms