Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Thumpd1Q99J36 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Gm18737-201ENSMUST00000173594 937 ntBASIC12.37□□□□□ -0.43
Thumpd1Q99J36 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Gm18195-201ENSMUST00000207604 706 ntBASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Thumpd1Q99J36 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thumpd1Q99J36 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.35□□□□□ -0.43
Thumpd1Q99J36 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms