Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb6Q91XZ4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Gm15240-201ENSMUST00000118156 720 ntBASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Gm24420-201ENSMUST00000176676 59 ntBASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Gm44872-201ENSMUST00000207864 420 ntBASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb6Q91XZ4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms