Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Mir1897-201ENSMUST00000122581 272 ntBASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Gm9229-201ENSMUST00000222777 126 ntBASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Mir125a-201ENSMUST00000083545 68 ntBASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhga4Q91XY4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga4Q91XY4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 BC001981-202ENSMUST00000191393 1545 ntBASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Gm46209-201ENSMUST00000217912 553 ntBASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga4Q91XY4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdhga4Q91XY4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms