Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gm17837-201ENSMUST00000186435 985 ntBASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gm37005-201ENSMUST00000193281 1164 ntBASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 AC124569.4-201ENSMUST00000223830 1220 ntBASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb17Q91VD8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb17Q91VD8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm22094-201ENSMUST00000158976 117 ntBASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 AC159297.2-201ENSMUST00000219567 1075 ntBASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb17Q91VD8 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Gm9506-201ENSMUST00000118516 320 ntBASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhb17Q91VD8 Gm7350-201ENSMUST00000120964 636 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms