Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.71□□□□□ -0.21
Vsx1Q91V10 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.71□□□□□ -0.21
Vsx1Q91V10 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.71□□□□□ -0.21
Vsx1Q91V10 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.71□□□□□ -0.21
Vsx1Q91V10 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.71□□□□□ -0.21
Vsx1Q91V10 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vsx1Q91V10 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx1Q91V10 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.71□□□□□ -0.22
Vsx1Q91V10 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx1Q91V10 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx1Q91V10 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.71□□□□□ -0.22
Vsx1Q91V10 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx1Q91V10 Carlr-201ENSMUST00000181515 2574 ntBASIC13.71□□□□□ -0.22
Vsx1Q91V10 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx1Q91V10 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx1Q91V10 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx1Q91V10 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx1Q91V10 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gm13689-201ENSMUST00000119360 685 ntBASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gm13350-201ENSMUST00000120519 479 ntBASIC13.7□□□□□ -0.22
Vsx1Q91V10 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gm4857-201ENSMUST00000192718 785 ntBASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx1Q91V10 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vsx1Q91V10 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm11524-201ENSMUST00000119349 807 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm24644-201ENSMUST00000157114 139 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm37466-201ENSMUST00000195692 652 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm5425-201ENSMUST00000214125 459 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 Gm45930-201ENSMUST00000221330 292 ntBASIC13.69□□□□□ -0.22
Vsx1Q91V10 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vsx1Q91V10 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vsx1Q91V10 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms