Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
StrcQ8VIM6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
StrcQ8VIM6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
StrcQ8VIM6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
StrcQ8VIM6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm2546-201ENSMUST00000182630 991 ntBASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm9555-201ENSMUST00000200908 583 ntBASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm8285-201ENSMUST00000208293 759 ntBASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm6458-201ENSMUST00000211573 635 ntBASIC16.12■□□□□ 0.17
StrcQ8VIM6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm44775-201ENSMUST00000207266 1456 ntBASIC16.12■□□□□ 0.17
StrcQ8VIM6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm14704-201ENSMUST00000120300 874 ntBASIC16.12■□□□□ 0.17
StrcQ8VIM6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm3096-201ENSMUST00000185770 364 ntBASIC16.12■□□□□ 0.17
StrcQ8VIM6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
StrcQ8VIM6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.11■□□□□ 0.17
StrcQ8VIM6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Gm8099-201ENSMUST00000200510 742 ntBASIC16.11■□□□□ 0.17
StrcQ8VIM6 Gm44100-201ENSMUST00000204329 436 ntBASIC16.11■□□□□ 0.17
StrcQ8VIM6 Gm44126-201ENSMUST00000204831 514 ntBASIC16.11■□□□□ 0.17
StrcQ8VIM6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.11■□□□□ 0.17
StrcQ8VIM6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
StrcQ8VIM6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Gm43378-201ENSMUST00000199336 582 ntBASIC16.1■□□□□ 0.17
StrcQ8VIM6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Gm18393-201ENSMUST00000208349 1131 ntBASIC16.1■□□□□ 0.17
StrcQ8VIM6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.1■□□□□ 0.17
StrcQ8VIM6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.1■□□□□ 0.17
StrcQ8VIM6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms