Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Gm15240-201ENSMUST00000118156 720 ntBASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Gm14719-201ENSMUST00000121891 340 ntBASIC15.23■□□□□ 0.03
Rpap2Q8VC34 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Gm9522-201ENSMUST00000182394 926 ntBASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Gm29667-201ENSMUST00000190817 490 ntBASIC15.23■□□□□ 0.03
Rpap2Q8VC34 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpap2Q8VC34 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.22■□□□□ 0.03
Rpap2Q8VC34 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpap2Q8VC34 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpap2Q8VC34 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpap2Q8VC34 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rpap2Q8VC34 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpap2Q8VC34 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rpap2Q8VC34 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpap2Q8VC34 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpap2Q8VC34 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.2■□□□□ 0.02
Rpap2Q8VC34 Gm21854-201ENSMUST00000179901 471 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms