Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Gm11594-201ENSMUST00000122313 162 ntBASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps39Q8R5L3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Gm2756-201ENSMUST00000195851 400 ntBASIC13.91□□□□□ -0.18
Vps39Q8R5L3 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.91□□□□□ -0.18
Vps39Q8R5L3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Gm29741-201ENSMUST00000192667 421 ntBASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Gm10253-201ENSMUST00000194270 940 ntBASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps39Q8R5L3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms