Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Nup35Q8R4R6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup35Q8R4R6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup35Q8R4R6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nup35Q8R4R6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.33□□□□□ -0.6
Nup35Q8R4R6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Mir5126-201ENSMUST00000175513 77 ntBASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.32□□□□□ -0.6
Nup35Q8R4R6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup35Q8R4R6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup35Q8R4R6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms