Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm4875-201ENSMUST00000118257 786 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm15824-201ENSMUST00000119516 955 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Acot6-202ENSMUST00000222921 3622 ntBASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Gm13829-201ENSMUST00000119600 138 ntBASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Gm10275-202ENSMUST00000168697 495 ntBASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Gm9899-201ENSMUST00000065519 555 ntBASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Gm10275-201ENSMUST00000092620 635 ntBASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdt1Q8R4E9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Mir1938-201ENSMUST00000158746 100 ntBASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 Gm15823-201ENSMUST00000064305 670 ntBASIC13.46□□□□□ -0.25
Cdt1Q8R4E9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms