Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Gm8927-201ENSMUST00000181978 981 ntBASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Gm3222-201ENSMUST00000071282 990 ntBASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf7Q8R0S1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Gm13385-201ENSMUST00000121089 220 ntBASIC16.37■□□□□ 0.21
Atf7Q8R0S1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Mir6956-201ENSMUST00000183598 62 ntBASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atf7Q8R0S1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf7Q8R0S1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms