Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rbm28Q8CGC6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Gm11918-201ENSMUST00000121660 179 ntBASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Gm37714-201ENSMUST00000194742 342 ntBASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rbm28Q8CGC6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.39■□□□□ 0.22
Rbm28Q8CGC6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rbm28Q8CGC6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Gm14127-201ENSMUST00000117906 678 ntBASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rbm28Q8CGC6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rbm28Q8CGC6 Gm5279-201ENSMUST00000199575 745 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms