Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm13823-201ENSMUST00000119930 345 ntBASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm9824-201ENSMUST00000178707 561 ntBASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm8000-201ENSMUST00000188378 592 ntBASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm5264-201ENSMUST00000190584 848 ntBASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Smim4Q8C1Q6 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 BC001981-202ENSMUST00000191393 1545 ntBASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim4Q8C1Q6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms