Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm12138-201ENSMUST00000122180 951 ntBASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm18307-201ENSMUST00000206864 949 ntBASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Mir497b-201ENSMUST00000093601 125 ntBASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm27701-201ENSMUST00000184498 110 ntBASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Mir7654-201ENSMUST00000185082 70 ntBASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap1Q8BTW8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Mir698-201ENSMUST00000102164 109 ntBASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap1Q8BTW8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms