Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm22065-201ENSMUST00000103753 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm22066-201ENSMUST00000103761 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm24932-201ENSMUST00000103763 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm24115-201ENSMUST00000103799 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm22190-201ENSMUST00000103827 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm22191-201ENSMUST00000103831 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm24721-201ENSMUST00000103849 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm28018-201ENSMUST00000103869 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm26399-201ENSMUST00000103937 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm6222-201ENSMUST00000120787 396 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm25349-201ENSMUST00000177728 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm23616-201ENSMUST00000177797 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm25871-201ENSMUST00000177816 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm24752-201ENSMUST00000178240 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm24496-201ENSMUST00000178287 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm25649-201ENSMUST00000178476 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm25548-201ENSMUST00000178681 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm23147-201ENSMUST00000178841 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm26095-201ENSMUST00000179270 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm22171-201ENSMUST00000179283 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm23936-201ENSMUST00000179354 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm22619-201ENSMUST00000179516 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm25255-201ENSMUST00000179579 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm24755-201ENSMUST00000179691 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm26506-201ENSMUST00000179692 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm25086-201ENSMUST00000179931 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm23243-201ENSMUST00000180047 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm24659-201ENSMUST00000180212 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm24169-201ENSMUST00000180244 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm23689-201ENSMUST00000180354 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm27359-201ENSMUST00000184153 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm27785-201ENSMUST00000184268 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm27466-201ENSMUST00000184396 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Gm27703-201ENSMUST00000184836 110 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc40Q8BI79 Gm13015-201ENSMUST00000118674 204 ntBASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Gm8584-201ENSMUST00000171982 758 ntBASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Gm43474-201ENSMUST00000196415 774 ntBASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc40Q8BI79 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms