Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Gm6415-201ENSMUST00000118488 348 ntBASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Gm5779-201ENSMUST00000218467 910 ntBASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
Clrn3Q8BHH8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clrn3Q8BHH8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.31
Clrn3Q8BHH8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clrn3Q8BHH8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clrn3Q8BHH8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Clrn3Q8BHH8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Gm8410-201ENSMUST00000117225 605 ntBASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 AA543401-201ENSMUST00000164248 1269 ntBASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn3Q8BHH8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Gm24543-201ENSMUST00000103867 82 ntBASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Gm15653-201ENSMUST00000119247 907 ntBASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn3Q8BHH8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms