Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.72□□□□□ -0.21
Ubp1Q811S7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Gm15393-201ENSMUST00000120499 219 ntBASIC13.72□□□□□ -0.21
Ubp1Q811S7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.72□□□□□ -0.21
Ubp1Q811S7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ubp1Q811S7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.71□□□□□ -0.21
Ubp1Q811S7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.71□□□□□ -0.21
Ubp1Q811S7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.71□□□□□ -0.21
Ubp1Q811S7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.71□□□□□ -0.21
Ubp1Q811S7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ubp1Q811S7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ubp1Q811S7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ubp1Q811S7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ubp1Q811S7 Acot6-202ENSMUST00000222921 3622 ntBASIC13.71□□□□□ -0.22
Ubp1Q811S7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ubp1Q811S7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ubp1Q811S7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ubp1Q811S7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ubp1Q811S7 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.7□□□□□ -0.22
Ubp1Q811S7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Mir7684-201ENSMUST00000183858 60 ntBASIC13.7□□□□□ -0.22
Ubp1Q811S7 Gm21470-201ENSMUST00000187680 696 ntBASIC13.7□□□□□ -0.22
Ubp1Q811S7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.7□□□□□ -0.22
Ubp1Q811S7 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.7□□□□□ -0.22
Ubp1Q811S7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ubp1Q811S7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms