Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Otub1Q7TQI3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.22□□□□□ -0.29
Otub1Q7TQI3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otub1Q7TQI3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Otub1Q7TQI3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Chchd1-203ENSMUST00000224633 557 ntBASIC13.2□□□□□ -0.3
Otub1Q7TQI3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Otub1Q7TQI3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms