Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup98Q6PFD9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.08■□□□□ 0.17
Nup98Q6PFD9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Gm19309-201ENSMUST00000218295 205 ntBASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nup98Q6PFD9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Snord83b-201ENSMUST00000104546 94 ntBASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.08■□□□□ 0.16
Nup98Q6PFD9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nup98Q6PFD9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.06■□□□□ 0.16
Nup98Q6PFD9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup98Q6PFD9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm11637-201ENSMUST00000120601 592 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Gm9257-201ENSMUST00000221254 232 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nup98Q6PFD9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms