Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Gm11918-201ENSMUST00000121660 179 ntBASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb4Q6P8W9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb4Q6P8W9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms