Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm24255-201ENSMUST00000104481 128 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm7029-201ENSMUST00000173226 450 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm6222-202ENSMUST00000182143 629 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm27320-201ENSMUST00000184892 109 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Itm2b-204ENSMUST00000228637 783 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Efs-202ENSMUST00000227037 2540 ntBASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scaf8Q6DID3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Gm12849-201ENSMUST00000120013 739 ntBASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.15■□□□□ 0.18
Scaf8Q6DID3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.15■□□□□ 0.18
Scaf8Q6DID3 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Gm8227-201ENSMUST00000223306 571 ntBASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.15■□□□□ 0.18
Scaf8Q6DID3 AC154849.3-201ENSMUST00000223733 1660 ntBASIC16.14■□□□□ 0.18
Scaf8Q6DID3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Scaf8Q6DID3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Gm14363-201ENSMUST00000122304 409 ntBASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Gm38158-201ENSMUST00000194617 339 ntBASIC16.14■□□□□ 0.17
Scaf8Q6DID3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Gm10146-201ENSMUST00000072739 309 ntBASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scaf8Q6DID3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms