Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Gm42627-201ENSMUST00000197347 224 ntBASIC12.6□□□□□ -0.39
Usf1Q61069 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Gm24526-201ENSMUST00000082921 158 ntBASIC12.6□□□□□ -0.39
Usf1Q61069 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.6□□□□□ -0.39
Usf1Q61069 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.6□□□□□ -0.39
Usf1Q61069 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Usf1Q61069 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Usf1Q61069 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.6□□□□□ -0.39
Usf1Q61069 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf1Q61069 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.59□□□□□ -0.39
Usf1Q61069 Gm13342-201ENSMUST00000121055 207 ntBASIC12.59□□□□□ -0.39
Usf1Q61069 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.59□□□□□ -0.39
Usf1Q61069 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.59□□□□□ -0.39
Usf1Q61069 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.59□□□□□ -0.39
Usf1Q61069 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Usf1Q61069 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Usf1Q61069 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Usf1Q61069 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usf1Q61069 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Usf1Q61069 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.58□□□□□ -0.39
Usf1Q61069 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Usf1Q61069 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usf1Q61069 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usf1Q61069 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usf1Q61069 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usf1Q61069 Gm12203-201ENSMUST00000118235 598 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Gm12209-201ENSMUST00000120089 596 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Usf1Q61069 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.58□□□□□ -0.4
Usf1Q61069 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.58□□□□□ -0.4
Usf1Q61069 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usf1Q61069 Gm16570-201ENSMUST00000161951 436 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.58□□□□□ -0.4
Usf1Q61069 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usf1Q61069 Gm4271-201ENSMUST00000174444 973 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usf1Q61069 Gm27682-201ENSMUST00000183930 110 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Itm2b-204ENSMUST00000228637 783 ntBASIC12.58□□□□□ -0.4
Usf1Q61069 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf1Q61069 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms