Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Mir1897-201ENSMUST00000122581 272 ntBASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Gm25948-201ENSMUST00000175334 112 ntBASIC14.43□□□□□ -0.1
Trim38Q5SZ99 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Gm44719-201ENSMUST00000206404 149 ntBASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim38Q5SZ99 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.42□□□□□ -0.1
Trim38Q5SZ99 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Gm9229-201ENSMUST00000222777 126 ntBASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Shd-206ENSMUST00000225145 998 ntBASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.42□□□□□ -0.1
Trim38Q5SZ99 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Gm15460-201ENSMUST00000118147 391 ntBASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim38Q5SZ99 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Gm46209-201ENSMUST00000217912 553 ntBASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim38Q5SZ99 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms