Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Gm15678-201ENSMUST00000117573 960 ntBASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.76□□□□□ -0.05
Shroom1Q5SX79 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Gm17150-201ENSMUST00000165577 381 ntBASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Gm37714-201ENSMUST00000194742 342 ntBASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Shroom1Q5SX79 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Gm13829-201ENSMUST00000119600 138 ntBASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shroom1Q5SX79 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms