Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 CT009718.3-201ENSMUST00000221116 367 ntBASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Gm9856-201ENSMUST00000217077 2578 ntBASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Gm42442-201ENSMUST00000197951 1133 ntBASIC23.97■■□□□ 1.43
Trim41Q5NCC3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Trim41Q5NCC3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Gm13323-201ENSMUST00000120245 1151 ntBASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Gm38002-201ENSMUST00000193255 180 ntBASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Gm7118-201ENSMUST00000200167 1003 ntBASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Trim41Q5NCC3 Gm7553-201ENSMUST00000185805 1426 ntBASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trim41Q5NCC3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Gm13612-201ENSMUST00000119276 390 ntBASIC23.94■■□□□ 1.42
Trim41Q5NCC3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Gm37259-201ENSMUST00000193903 849 ntBASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim41Q5NCC3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim41Q5NCC3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms