Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm18827-201ENSMUST00000188341 790 ntBASIC17.18■□□□□ 0.34
Usp48Q3V0C5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Gm37230-201ENSMUST00000194491 818 ntBASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.17■□□□□ 0.34
Usp48Q3V0C5 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp48Q3V0C5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp48Q3V0C5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Gm8749-201ENSMUST00000117737 331 ntBASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Gm7561-201ENSMUST00000211203 886 ntBASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Gm17795-201ENSMUST00000214505 757 ntBASIC17.15■□□□□ 0.34
Usp48Q3V0C5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp48Q3V0C5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp48Q3V0C5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp48Q3V0C5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms