Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Gm29741-201ENSMUST00000192667 421 ntBASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.09□□□□□ -0.31
Brf2Q3UAW9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gm14701-201ENSMUST00000117156 348 ntBASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gm27622-201ENSMUST00000183779 60 ntBASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gm27430-201ENSMUST00000184585 107 ntBASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Gm44333-201ENSMUST00000197168 107 ntBASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Brf2Q3UAW9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Brf2Q3UAW9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Brf2Q3UAW9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Mir1897-201ENSMUST00000122581 272 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Gm25144-201ENSMUST00000179561 110 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Gm25352-201ENSMUST00000179815 110 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brf2Q3UAW9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms