Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.61□□□□□ -0.23
Col9a1Q05722 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm15061-201ENSMUST00000121076 1046 ntBASIC13.6□□□□□ -0.23
Col9a1Q05722 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.6□□□□□ -0.23
Col9a1Q05722 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm23699-201ENSMUST00000158835 135 ntBASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.6□□□□□ -0.23
Col9a1Q05722 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Spcs1-203ENSMUST00000226374 592 ntBASIC13.6□□□□□ -0.23
Col9a1Q05722 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Gm10179-201ENSMUST00000086233 688 ntBASIC13.6□□□□□ -0.23
Col9a1Q05722 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col9a1Q05722 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col9a1Q05722 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.59□□□□□ -0.23
Col9a1Q05722 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm12485-201ENSMUST00000119641 291 ntBASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC13.59□□□□□ -0.23
Col9a1Q05722 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm45701-201ENSMUST00000212049 235 ntBASIC13.59□□□□□ -0.23
Col9a1Q05722 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.59□□□□□ -0.23
Col9a1Q05722 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.59□□□□□ -0.23
Col9a1Q05722 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm8385-201ENSMUST00000058999 643 ntBASIC13.59□□□□□ -0.23
Col9a1Q05722 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.59□□□□□ -0.23
Col9a1Q05722 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a1Q05722 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col9a1Q05722 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms