Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm15240-201ENSMUST00000118156 720 ntBASIC13.85□□□□□ -0.19
Col6a2Q02788 Gm12341-201ENSMUST00000119724 503 ntBASIC13.85□□□□□ -0.19
Col6a2Q02788 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col6a2Q02788 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a2Q02788 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a2Q02788 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a2Q02788 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col6a2Q02788 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.83□□□□□ -0.2
Col6a2Q02788 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col6a2Q02788 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.83□□□□□ -0.2
Col6a2Q02788 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Col6a2Q02788 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col6a2Q02788 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.83□□□□□ -0.2
Col6a2Q02788 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.83□□□□□ -0.2
Col6a2Q02788 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col6a2Q02788 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.82□□□□□ -0.2
Col6a2Q02788 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Gm11918-201ENSMUST00000121660 179 ntBASIC13.82□□□□□ -0.2
Col6a2Q02788 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms