Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Npas1P97459 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Gm6550-201ENSMUST00000187574 993 ntBASIC11.66□□□□□ -0.54
Npas1P97459 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Gm43347-201ENSMUST00000200226 580 ntBASIC11.66□□□□□ -0.54
Npas1P97459 Olfr286-202ENSMUST00000205305 969 ntBASIC11.66□□□□□ -0.54
Npas1P97459 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.66□□□□□ -0.54
Npas1P97459 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Npas1P97459 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.66□□□□□ -0.54
Npas1P97459 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Npas1P97459 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Npas1P97459 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Npas1P97459 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.65□□□□□ -0.54
Npas1P97459 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.65□□□□□ -0.54
Npas1P97459 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.65□□□□□ -0.54
Npas1P97459 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.65□□□□□ -0.54
Npas1P97459 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Npas1P97459 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.65□□□□□ -0.54
Npas1P97459 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.65□□□□□ -0.54
Npas1P97459 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Npas1P97459 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npas1P97459 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.65□□□□□ -0.55
Npas1P97459 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.65□□□□□ -0.55
Npas1P97459 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Npas1P97459 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Npas1P97459 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Npas1P97459 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Npas1P97459 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Npas1P97459 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Npas1P97459 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.64□□□□□ -0.55
Npas1P97459 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.64□□□□□ -0.55
Npas1P97459 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Npas1P97459 Gm11764-201ENSMUST00000120221 623 ntBASIC11.64□□□□□ -0.55
Npas1P97459 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Npas1P97459 Gm7230-201ENSMUST00000173026 815 ntBASIC11.64□□□□□ -0.55
Npas1P97459 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Npas1P97459 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.64□□□□□ -0.55
Npas1P97459 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms