Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Msx3P70354 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Msx3P70354 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Msx3P70354 Gm26308-201ENSMUST00000157768 69 ntBASIC14.29□□□□□ -0.12
Msx3P70354 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Gm27430-201ENSMUST00000184585 107 ntBASIC14.29□□□□□ -0.12
Msx3P70354 Gm44333-201ENSMUST00000197168 107 ntBASIC14.29□□□□□ -0.12
Msx3P70354 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.29□□□□□ -0.12
Msx3P70354 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.29□□□□□ -0.12
Msx3P70354 Gm9229-201ENSMUST00000222777 126 ntBASIC14.29□□□□□ -0.12
Msx3P70354 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.29□□□□□ -0.12
Msx3P70354 Shd-206ENSMUST00000225145 998 ntBASIC14.29□□□□□ -0.12
Msx3P70354 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Msx3P70354 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msx3P70354 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msx3P70354 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.29□□□□□ -0.12
Msx3P70354 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Msx3P70354 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Msx3P70354 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Msx3P70354 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msx3P70354 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Msx3P70354 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Msx3P70354 Gm15460-201ENSMUST00000118147 391 ntBASIC14.28□□□□□ -0.12
Msx3P70354 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.28□□□□□ -0.12
Msx3P70354 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.28□□□□□ -0.12
Msx3P70354 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.28□□□□□ -0.12
Msx3P70354 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Msx3P70354 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Msx3P70354 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msx3P70354 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msx3P70354 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Msx3P70354 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Msx3P70354 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.27□□□□□ -0.12
Msx3P70354 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Msx3P70354 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msx3P70354 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Msx3P70354 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msx3P70354 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.27□□□□□ -0.12
Msx3P70354 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msx3P70354 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.27□□□□□ -0.12
Msx3P70354 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Mir698-201ENSMUST00000102164 109 ntBASIC14.27□□□□□ -0.13
Msx3P70354 Gm23935-201ENSMUST00000102303 57 ntBASIC14.27□□□□□ -0.13
Msx3P70354 Gm24270-201ENSMUST00000102326 57 ntBASIC14.27□□□□□ -0.13
Msx3P70354 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Msx3P70354 Gm24245-201ENSMUST00000157318 57 ntBASIC14.27□□□□□ -0.13
Msx3P70354 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.27□□□□□ -0.13
Msx3P70354 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Msx3P70354 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Msx3P70354 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.27□□□□□ -0.13
Msx3P70354 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Msx3P70354 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Msx3P70354 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msx3P70354 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Msx3P70354 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.26□□□□□ -0.13
Msx3P70354 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.26□□□□□ -0.13
Msx3P70354 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.26□□□□□ -0.13
Msx3P70354 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.26□□□□□ -0.13
Msx3P70354 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.26□□□□□ -0.13
Msx3P70354 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Msx3P70354 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msx3P70354 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.26□□□□□ -0.13
Msx3P70354 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms