Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.2□□□□□ -0.14
Tubgcp3P58854 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.2□□□□□ -0.14
Tubgcp3P58854 Gm6916-202ENSMUST00000205523 195 ntBASIC14.2□□□□□ -0.14
Tubgcp3P58854 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.2□□□□□ -0.14
Tubgcp3P58854 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.2□□□□□ -0.14
Tubgcp3P58854 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.2□□□□□ -0.14
Tubgcp3P58854 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubgcp3P58854 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.19□□□□□ -0.14
Tubgcp3P58854 Mir1897-201ENSMUST00000122581 272 ntBASIC14.19□□□□□ -0.14
Tubgcp3P58854 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Gm25948-201ENSMUST00000175334 112 ntBASIC14.19□□□□□ -0.14
Tubgcp3P58854 Gm27622-201ENSMUST00000183779 60 ntBASIC14.19□□□□□ -0.14
Tubgcp3P58854 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Gm18027-201ENSMUST00000218947 619 ntBASIC14.19□□□□□ -0.14
Tubgcp3P58854 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Tubgcp3P58854 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Shd-206ENSMUST00000225145 998 ntBASIC14.18□□□□□ -0.14
Tubgcp3P58854 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubgcp3P58854 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms