Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.9□□□□□ -0.18
Fdft1P53798 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.9□□□□□ -0.18
Fdft1P53798 Gm27631-201ENSMUST00000184163 466 ntBASIC13.9□□□□□ -0.18
Fdft1P53798 Gm18766-201ENSMUST00000189811 808 ntBASIC13.9□□□□□ -0.18
Fdft1P53798 Gm29541-201ENSMUST00000191351 678 ntBASIC13.9□□□□□ -0.18
Fdft1P53798 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Fdft1P53798 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Fdft1P53798 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.9□□□□□ -0.18
Fdft1P53798 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fdft1P53798 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Fdft1P53798 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Fdft1P53798 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Fdft1P53798 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Fdft1P53798 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.89□□□□□ -0.19
Fdft1P53798 Gm15957-201ENSMUST00000118893 974 ntBASIC13.89□□□□□ -0.19
Fdft1P53798 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Fdft1P53798 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Gm43575-201ENSMUST00000196420 516 ntBASIC13.89□□□□□ -0.19
Fdft1P53798 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.89□□□□□ -0.19
Fdft1P53798 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.89□□□□□ -0.19
Fdft1P53798 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Fdft1P53798 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Fdft1P53798 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.89□□□□□ -0.19
Fdft1P53798 BC001981-202ENSMUST00000191393 1545 ntBASIC13.89□□□□□ -0.19
Fdft1P53798 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fdft1P53798 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Fdft1P53798 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Fdft1P53798 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Fdft1P53798 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Fdft1P53798 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Fdft1P53798 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Fdft1P53798 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Gm23935-201ENSMUST00000102303 57 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 Gm24270-201ENSMUST00000102326 57 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.88□□□□□ -0.19
Fdft1P53798 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Gm24245-201ENSMUST00000157318 57 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.88□□□□□ -0.19
Fdft1P53798 Gm10253-201ENSMUST00000194270 940 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 AA619741-201ENSMUST00000195095 646 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 Gm7774-201ENSMUST00000200064 533 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Gm45453-201ENSMUST00000211758 853 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 Gm5779-201ENSMUST00000218467 910 ntBASIC13.88□□□□□ -0.19
Fdft1P53798 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Fdft1P53798 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Fdft1P53798 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Fdft1P53798 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Fdft1P53798 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Fdft1P53798 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Grk6-205ENSMUST00000224653 2976 ntBASIC13.87□□□□□ -0.19
Fdft1P53798 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.87□□□□□ -0.19
Fdft1P53798 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.87□□□□□ -0.19
Fdft1P53798 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Fdft1P53798 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms