Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx2P48379 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx2P48379 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx2P48379 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.56□□□□□ -0.08
Rfx2P48379 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx2P48379 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx2P48379 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx2P48379 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Rfx2P48379 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx2P48379 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfx2P48379 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.55□□□□□ -0.08
Rfx2P48379 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.55□□□□□ -0.08
Rfx2P48379 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.55□□□□□ -0.08
Rfx2P48379 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.55□□□□□ -0.08
Rfx2P48379 Gm37917-201ENSMUST00000194711 392 ntBASIC14.55□□□□□ -0.08
Rfx2P48379 Gm5425-201ENSMUST00000214125 459 ntBASIC14.55□□□□□ -0.08
Rfx2P48379 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.55□□□□□ -0.08
Rfx2P48379 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.55□□□□□ -0.08
Rfx2P48379 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rfx2P48379 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfx2P48379 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.54□□□□□ -0.08
Rfx2P48379 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.54□□□□□ -0.08
Rfx2P48379 Gm4804-201ENSMUST00000182234 999 ntBASIC14.54□□□□□ -0.08
Rfx2P48379 Gm6745-201ENSMUST00000199216 526 ntBASIC14.54□□□□□ -0.08
Rfx2P48379 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.54□□□□□ -0.08
Rfx2P48379 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.54□□□□□ -0.08
Rfx2P48379 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Rfx2P48379 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.54□□□□□ -0.08
Rfx2P48379 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.54□□□□□ -0.08
Rfx2P48379 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfx2P48379 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfx2P48379 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rfx2P48379 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rfx2P48379 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfx2P48379 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Gm10766-202ENSMUST00000194123 606 ntBASIC14.53□□□□□ -0.08
Rfx2P48379 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.53□□□□□ -0.08
Rfx2P48379 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfx2P48379 Gm45668-201ENSMUST00000211271 493 ntBASIC14.53□□□□□ -0.08
Rfx2P48379 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx2P48379 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rfx2P48379 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rfx2P48379 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx2P48379 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx2P48379 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.52□□□□□ -0.08
Rfx2P48379 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx2P48379 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx2P48379 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rfx2P48379 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx2P48379 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms