Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC20.39■□□□□ 0.86
Chd1P40201 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Gm37737-201ENSMUST00000195013 1638 ntBASIC20.39■□□□□ 0.85
Chd1P40201 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Chd1P40201 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC20.39■□□□□ 0.85
Chd1P40201 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Gm5070-201ENSMUST00000177599 862 ntBASIC20.39■□□□□ 0.85
Chd1P40201 Gm37201-201ENSMUST00000191845 523 ntBASIC20.39■□□□□ 0.85
Chd1P40201 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC20.39■□□□□ 0.85
Chd1P40201 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd1P40201 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Chd1P40201 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Chd1P40201 Daam2-202ENSMUST00000224595 1926 ntBASIC20.38■□□□□ 0.85
Chd1P40201 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC20.38■□□□□ 0.85
Chd1P40201 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Chd1P40201 Gm17391-201ENSMUST00000171036 126 ntBASIC20.38■□□□□ 0.85
Chd1P40201 Gm45433-201ENSMUST00000209386 247 ntBASIC20.38■□□□□ 0.85
Chd1P40201 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Gm22058-201ENSMUST00000083393 310 ntBASIC20.38■□□□□ 0.85
Chd1P40201 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.38■□□□□ 0.85
Chd1P40201 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd1P40201 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Chd1P40201 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Efs-202ENSMUST00000227037 2540 ntBASIC20.37■□□□□ 0.85
Chd1P40201 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Chd1P40201 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC20.37■□□□□ 0.85
Chd1P40201 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC20.37■□□□□ 0.85
Chd1P40201 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC20.37■□□□□ 0.85
Chd1P40201 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Chd1P40201 AC154849.4-201ENSMUST00000224868 365 ntBASIC20.37■□□□□ 0.85
Chd1P40201 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Chd1P40201 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
Chd1P40201 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC20.37■□□□□ 0.85
Chd1P40201 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd1P40201 Gm7899-201ENSMUST00000192935 1897 ntBASIC20.37■□□□□ 0.85
Chd1P40201 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC20.37■□□□□ 0.85
Chd1P40201 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Gm13296-201ENSMUST00000117854 997 ntBASIC20.36■□□□□ 0.85
Chd1P40201 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC20.36■□□□□ 0.85
Chd1P40201 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC20.36■□□□□ 0.85
Chd1P40201 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Chd1P40201 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Chd1P40201 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Gm13492-201ENSMUST00000119772 665 ntBASIC20.36■□□□□ 0.85
Chd1P40201 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC20.36■□□□□ 0.85
Chd1P40201 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Gm44645-201ENSMUST00000205492 1653 ntBASIC20.36■□□□□ 0.85
Chd1P40201 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC20.36■□□□□ 0.85
Chd1P40201 Gm44999-201ENSMUST00000207456 1493 ntBASIC20.36■□□□□ 0.85
Chd1P40201 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC20.36■□□□□ 0.85
Chd1P40201 Gm5904-201ENSMUST00000210286 865 ntBASIC20.36■□□□□ 0.85
Chd1P40201 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC20.36■□□□□ 0.85
Chd1P40201 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC20.36■□□□□ 0.85
Chd1P40201 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chd1P40201 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms