Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Gm28911-201ENSMUST00000188837 117 ntBASIC14.26□□□□□ -0.13
Nfkb1P25799 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.26□□□□□ -0.13
Nfkb1P25799 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.26□□□□□ -0.13
Nfkb1P25799 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.26□□□□□ -0.13
Nfkb1P25799 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.25□□□□□ -0.13
Nfkb1P25799 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nfkb1P25799 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.25□□□□□ -0.13
Nfkb1P25799 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.25□□□□□ -0.13
Nfkb1P25799 Gm8602-201ENSMUST00000184045 607 ntBASIC14.25□□□□□ -0.13
Nfkb1P25799 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.25□□□□□ -0.13
Nfkb1P25799 Gm43433-201ENSMUST00000196573 481 ntBASIC14.25□□□□□ -0.13
Nfkb1P25799 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.25□□□□□ -0.13
Nfkb1P25799 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.25□□□□□ -0.13
Nfkb1P25799 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.25□□□□□ -0.13
Nfkb1P25799 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.25□□□□□ -0.13
Nfkb1P25799 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.25□□□□□ -0.13
Nfkb1P25799 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.25□□□□□ -0.13
Nfkb1P25799 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nfkb1P25799 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Gm15806-201ENSMUST00000120696 955 ntBASIC14.24□□□□□ -0.13
Nfkb1P25799 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.24□□□□□ -0.13
Nfkb1P25799 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.24□□□□□ -0.13
Nfkb1P25799 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.24□□□□□ -0.13
Nfkb1P25799 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Nfkb1P25799 Gm43094-201ENSMUST00000196549 921 ntBASIC14.24□□□□□ -0.13
Nfkb1P25799 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nfkb1P25799 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.24□□□□□ -0.13
Nfkb1P25799 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.24□□□□□ -0.13
Nfkb1P25799 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.24□□□□□ -0.13
Nfkb1P25799 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nfkb1P25799 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms