Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Gm27704-201ENSMUST00000185094 107 ntBASIC10.76□□□□□ -0.69
Ccl1P10146 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.76□□□□□ -0.69
Ccl1P10146 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccl1P10146 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ccl1P10146 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccl1P10146 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.76□□□□□ -0.69
Ccl1P10146 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccl1P10146 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.75□□□□□ -0.69
Ccl1P10146 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Gm13418-201ENSMUST00000119097 944 ntBASIC10.75□□□□□ -0.69
Ccl1P10146 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.75□□□□□ -0.69
Ccl1P10146 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccl1P10146 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Ccl1P10146 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccl1P10146 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl1P10146 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Ccl1P10146 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl1P10146 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.74□□□□□ -0.69
Ccl1P10146 Gm37230-201ENSMUST00000194491 818 ntBASIC10.74□□□□□ -0.69
Ccl1P10146 Gm6089-201ENSMUST00000197666 938 ntBASIC10.74□□□□□ -0.69
Ccl1P10146 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.74□□□□□ -0.69
Ccl1P10146 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl1P10146 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms