Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
NclP09405 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NclP09405 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NclP09405 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
NclP09405 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC20.57■□□□□ 0.88
NclP09405 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC20.57■□□□□ 0.88
NclP09405 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC20.57■□□□□ 0.88
NclP09405 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NclP09405 Gm3809-201ENSMUST00000180973 1006 ntBASIC20.57■□□□□ 0.88
NclP09405 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
NclP09405 Gm15222-202ENSMUST00000228667 1726 ntBASIC20.57■□□□□ 0.88
NclP09405 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NclP09405 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NclP09405 Gm37015-201ENSMUST00000192763 1521 ntBASIC20.57■□□□□ 0.88
NclP09405 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NclP09405 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC20.56■□□□□ 0.88
NclP09405 Mir698-201ENSMUST00000102164 109 ntBASIC20.56■□□□□ 0.88
NclP09405 Mir692-1-201ENSMUST00000102263 109 ntBASIC20.56■□□□□ 0.88
NclP09405 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NclP09405 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC20.56■□□□□ 0.88
NclP09405 Gm4971-201ENSMUST00000205991 1108 ntBASIC20.56■□□□□ 0.88
NclP09405 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC20.56■□□□□ 0.88
NclP09405 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Gm5035-201ENSMUST00000215581 927 ntBASIC20.56■□□□□ 0.88
NclP09405 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NclP09405 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC20.56■□□□□ 0.88
NclP09405 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NclP09405 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC20.56■□□□□ 0.88
NclP09405 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC20.55■□□□□ 0.88
NclP09405 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC20.55■□□□□ 0.88
NclP09405 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC20.55■□□□□ 0.88
NclP09405 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Gm25857-201ENSMUST00000082788 129 ntBASIC20.55■□□□□ 0.88
NclP09405 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NclP09405 Gm43205-201ENSMUST00000198622 1968 ntBASIC20.55■□□□□ 0.88
NclP09405 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
NclP09405 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NclP09405 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NclP09405 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NclP09405 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC20.54■□□□□ 0.88
NclP09405 Gm27892-201ENSMUST00000185017 106 ntBASIC20.54■□□□□ 0.88
NclP09405 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NclP09405 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Gm8131-201ENSMUST00000213783 1570 ntBASIC20.54■□□□□ 0.88
NclP09405 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NclP09405 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NclP09405 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NclP09405 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms