Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.87□□□□□ -0.67
Hoxd3P09027 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.87□□□□□ -0.67
Hoxd3P09027 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm22189-201ENSMUST00000103822 86 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm22119-201ENSMUST00000175594 99 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm21854-201ENSMUST00000179901 471 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm4804-201ENSMUST00000182234 999 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm28760-201ENSMUST00000185995 736 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm37629-201ENSMUST00000193635 1050 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm37641-201ENSMUST00000193837 239 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm44387-201ENSMUST00000196298 145 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm42612-201ENSMUST00000197986 623 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Gm43170-201ENSMUST00000199827 612 ntBASIC10.86□□□□□ -0.67
Hoxd3P09027 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxd3P09027 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxd3P09027 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.85□□□□□ -0.67
Hoxd3P09027 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Hoxd3P09027 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxd3P09027 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.85□□□□□ -0.67
Hoxd3P09027 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hoxd3P09027 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.85□□□□□ -0.67
Hoxd3P09027 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms