Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.14□□□□□ -0.31
ApoeP08226 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.14□□□□□ -0.31
ApoeP08226 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ApoeP08226 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.14□□□□□ -0.31
ApoeP08226 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.14□□□□□ -0.31
ApoeP08226 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.14□□□□□ -0.31
ApoeP08226 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.14□□□□□ -0.31
ApoeP08226 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ApoeP08226 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ApoeP08226 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ApoeP08226 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.13□□□□□ -0.31
ApoeP08226 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ApoeP08226 Gm11452-201ENSMUST00000122376 690 ntBASIC13.13□□□□□ -0.31
ApoeP08226 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.13□□□□□ -0.31
ApoeP08226 Mir5126-201ENSMUST00000175513 77 ntBASIC13.13□□□□□ -0.31
ApoeP08226 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.13□□□□□ -0.31
ApoeP08226 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.13□□□□□ -0.31
ApoeP08226 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.13□□□□□ -0.31
ApoeP08226 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.13□□□□□ -0.31
ApoeP08226 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.13□□□□□ -0.31
ApoeP08226 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ApoeP08226 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.13□□□□□ -0.31
ApoeP08226 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.12□□□□□ -0.31
ApoeP08226 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.12□□□□□ -0.31
ApoeP08226 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ApoeP08226 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.12□□□□□ -0.31
ApoeP08226 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Gm44719-201ENSMUST00000206404 149 ntBASIC13.12□□□□□ -0.31
ApoeP08226 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.12□□□□□ -0.31
ApoeP08226 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.12□□□□□ -0.31
ApoeP08226 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ApoeP08226 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.12□□□□□ -0.31
ApoeP08226 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.12□□□□□ -0.31
ApoeP08226 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.12□□□□□ -0.31
ApoeP08226 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.12□□□□□ -0.31
ApoeP08226 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.12□□□□□ -0.31
ApoeP08226 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ApoeP08226 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.11□□□□□ -0.31
ApoeP08226 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ApoeP08226 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.11□□□□□ -0.31
ApoeP08226 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ApoeP08226 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.11□□□□□ -0.31
ApoeP08226 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms