Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
P04213 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 Gm25948-201ENSMUST00000175334 112 ntBASIC13.33□□□□□ -0.28
P04213 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
P04213 Gm8396-201ENSMUST00000057361 823 ntBASIC13.33□□□□□ -0.28
P04213 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P04213 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.33□□□□□ -0.28
P04213 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
P04213 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P04213 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04213 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
P04213 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
P04213 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.32□□□□□ -0.28
P04213 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
P04213 Gm6736-201ENSMUST00000166583 948 ntBASIC13.32□□□□□ -0.28
P04213 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
P04213 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.32□□□□□ -0.28
P04213 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
P04213 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.32□□□□□ -0.28
P04213 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04213 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
P04213 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.31□□□□□ -0.28
P04213 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P04213 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P04213 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P04213 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.31□□□□□ -0.28
P04213 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P04213 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
P04213 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Gm33320-201ENSMUST00000192232 530 ntBASIC13.31□□□□□ -0.28
P04213 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P04213 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P04213 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P04213 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P04213 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P04213 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.31□□□□□ -0.28
P04213 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P04213 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
P04213 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
P04213 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04213 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.31□□□□□ -0.28
P04213 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P04213 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms