Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P01739 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
P01739 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
P01739 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
P01739 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
P01739 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
P01739 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
P01739 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01739 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01739 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Acot6-202ENSMUST00000222921 3622 ntBASIC10.49□□□□□ -0.73
P01739 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.49□□□□□ -0.73
P01739 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01739 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.49□□□□□ -0.73
P01739 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
P01739 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01739 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.49□□□□□ -0.73
P01739 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.49□□□□□ -0.73
P01739 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.49□□□□□ -0.73
P01739 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.49□□□□□ -0.73
P01739 Gm27631-201ENSMUST00000184163 466 ntBASIC10.49□□□□□ -0.73
P01739 Gm44335-201ENSMUST00000196879 141 ntBASIC10.49□□□□□ -0.73
P01739 Gm44297-201ENSMUST00000198304 141 ntBASIC10.49□□□□□ -0.73
P01739 Gm44346-201ENSMUST00000198851 141 ntBASIC10.49□□□□□ -0.73
P01739 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.49□□□□□ -0.73
P01739 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01739 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
P01739 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.49□□□□□ -0.73
P01739 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
P01739 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
P01739 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01739 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.49□□□□□ -0.73
P01739 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
P01739 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.48□□□□□ -0.73
P01739 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.48□□□□□ -0.73
P01739 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
P01739 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Gm14822-201ENSMUST00000122247 291 ntBASIC10.48□□□□□ -0.73
P01739 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.48□□□□□ -0.73
P01739 Gm24513-201ENSMUST00000174964 138 ntBASIC10.48□□□□□ -0.73
P01739 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.48□□□□□ -0.73
P01739 Gm27397-201ENSMUST00000184997 107 ntBASIC10.48□□□□□ -0.73
P01739 Gm2213-201ENSMUST00000197485 688 ntBASIC10.48□□□□□ -0.73
P01739 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.48□□□□□ -0.73
P01739 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Mir125a-201ENSMUST00000083545 68 ntBASIC10.48□□□□□ -0.73
P01739 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.48□□□□□ -0.73
P01739 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
P01739 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
P01739 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01739 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P01739 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms