Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Vti1aO89116 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Vti1aO89116 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.97□□□□□ -0.01
Vti1aO89116 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.97□□□□□ -0.01
Vti1aO89116 Gm13829-201ENSMUST00000119600 138 ntBASIC14.97□□□□□ -0.01
Vti1aO89116 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Vti1aO89116 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.97□□□□□ -0.01
Vti1aO89116 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.97□□□□□ -0.01
Vti1aO89116 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Gm5354-201ENSMUST00000182417 973 ntBASIC14.97□□□□□ -0.01
Vti1aO89116 Gm21470-201ENSMUST00000187680 696 ntBASIC14.97□□□□□ -0.01
Vti1aO89116 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.97□□□□□ -0.01
Vti1aO89116 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Vti1aO89116 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.97□□□□□ -0.01
Vti1aO89116 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Vti1aO89116 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vti1aO89116 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Vti1aO89116 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.97□□□□□ -0.01
Vti1aO89116 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.97□□□□□ -0.01
Vti1aO89116 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.97□□□□□ -0.01
Vti1aO89116 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vti1aO89116 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vti1aO89116 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vti1aO89116 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Vti1aO89116 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.96□□□□□ -0.01
Vti1aO89116 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Vti1aO89116 Gm9002-201ENSMUST00000178437 499 ntBASIC14.96□□□□□ -0.01
Vti1aO89116 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Vti1aO89116 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.96□□□□□ -0.01
Vti1aO89116 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vti1aO89116 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vti1aO89116 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vti1aO89116 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
Vti1aO89116 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.96□□□□□ -0.02
Vti1aO89116 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vti1aO89116 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.95□□□□□ -0.02
Vti1aO89116 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.95□□□□□ -0.02
Vti1aO89116 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.95□□□□□ -0.02
Vti1aO89116 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.95□□□□□ -0.02
Vti1aO89116 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.95□□□□□ -0.02
Vti1aO89116 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.95□□□□□ -0.02
Vti1aO89116 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.95□□□□□ -0.02
Vti1aO89116 Gm6266-201ENSMUST00000203844 806 ntBASIC14.95□□□□□ -0.02
Vti1aO89116 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Gm17795-201ENSMUST00000214505 757 ntBASIC14.95□□□□□ -0.02
Vti1aO89116 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.95□□□□□ -0.02
Vti1aO89116 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.95□□□□□ -0.02
Vti1aO89116 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1aO89116 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.94□□□□□ -0.02
Vti1aO89116 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vti1aO89116 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Gm12341-201ENSMUST00000119724 503 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms