Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Setdb1O88974 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Setdb1O88974 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.88■□□□□ 0.29
Setdb1O88974 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Setdb1O88974 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Setdb1O88974 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Gm15808-201ENSMUST00000119046 604 ntBASIC16.88■□□□□ 0.29
Setdb1O88974 Gm15376-201ENSMUST00000122258 783 ntBASIC16.88■□□□□ 0.29
Setdb1O88974 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.88■□□□□ 0.29
Setdb1O88974 Mir7070-201ENSMUST00000183657 86 ntBASIC16.88■□□□□ 0.29
Setdb1O88974 Gm19184-201ENSMUST00000196798 928 ntBASIC16.88■□□□□ 0.29
Setdb1O88974 Gm45880-201ENSMUST00000213041 853 ntBASIC16.88■□□□□ 0.29
Setdb1O88974 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.88■□□□□ 0.29
Setdb1O88974 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.88■□□□□ 0.29
Setdb1O88974 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Mir497b-201ENSMUST00000093601 125 ntBASIC16.88■□□□□ 0.29
Setdb1O88974 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Setdb1O88974 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Setdb1O88974 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.87■□□□□ 0.29
Setdb1O88974 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Setdb1O88974 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.87■□□□□ 0.29
Setdb1O88974 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Setdb1O88974 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.87■□□□□ 0.29
Setdb1O88974 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.87■□□□□ 0.29
Setdb1O88974 Mir5132-201ENSMUST00000175166 71 ntBASIC16.87■□□□□ 0.29
Setdb1O88974 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.87■□□□□ 0.29
Setdb1O88974 Gm27501-201ENSMUST00000183599 107 ntBASIC16.87■□□□□ 0.29
Setdb1O88974 Gm38002-201ENSMUST00000193255 180 ntBASIC16.87■□□□□ 0.29
Setdb1O88974 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.87■□□□□ 0.29
Setdb1O88974 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Setdb1O88974 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Setdb1O88974 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Setdb1O88974 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Setdb1O88974 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.86■□□□□ 0.29
Setdb1O88974 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Setdb1O88974 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.86■□□□□ 0.29
Setdb1O88974 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Setdb1O88974 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Gm22018-201ENSMUST00000104357 131 ntBASIC16.86■□□□□ 0.29
Setdb1O88974 Gm11524-201ENSMUST00000119349 807 ntBASIC16.86■□□□□ 0.29
Setdb1O88974 Gm13689-201ENSMUST00000119360 685 ntBASIC16.86■□□□□ 0.29
Setdb1O88974 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.86■□□□□ 0.29
Setdb1O88974 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.86■□□□□ 0.29
Setdb1O88974 Gm43094-201ENSMUST00000196549 921 ntBASIC16.86■□□□□ 0.29
Setdb1O88974 Gm18905-201ENSMUST00000205454 928 ntBASIC16.86■□□□□ 0.29
Setdb1O88974 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.86■□□□□ 0.29
Setdb1O88974 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Setdb1O88974 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Setdb1O88974 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms