Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.29□□□□□ -0.12
Sdc4O35988 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sdc4O35988 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.29□□□□□ -0.12
Sdc4O35988 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.29□□□□□ -0.12
Sdc4O35988 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sdc4O35988 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.28□□□□□ -0.12
Sdc4O35988 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.28□□□□□ -0.12
Sdc4O35988 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.28□□□□□ -0.12
Sdc4O35988 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sdc4O35988 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sdc4O35988 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.28□□□□□ -0.12
Sdc4O35988 Gm28911-201ENSMUST00000188837 117 ntBASIC14.28□□□□□ -0.12
Sdc4O35988 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.28□□□□□ -0.12
Sdc4O35988 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.28□□□□□ -0.12
Sdc4O35988 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.28□□□□□ -0.12
Sdc4O35988 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.28□□□□□ -0.12
Sdc4O35988 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Sdc4O35988 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.28□□□□□ -0.12
Sdc4O35988 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc4O35988 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Sdc4O35988 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc4O35988 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc4O35988 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc4O35988 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Sdc4O35988 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.27□□□□□ -0.12
Sdc4O35988 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc4O35988 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc4O35988 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc4O35988 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc4O35988 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc4O35988 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Sdc4O35988 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sdc4O35988 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.27□□□□□ -0.13
Sdc4O35988 Gm11524-201ENSMUST00000119349 807 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 Gm15806-201ENSMUST00000120696 955 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sdc4O35988 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 Gm18187-201ENSMUST00000196476 984 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 Gm19078-201ENSMUST00000206311 727 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.27□□□□□ -0.13
Sdc4O35988 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sdc4O35988 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Sdc4O35988 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Sdc4O35988 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.27□□□□□ -0.13
Sdc4O35988 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc4O35988 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sdc4O35988 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.26□□□□□ -0.13
Sdc4O35988 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sdc4O35988 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.26□□□□□ -0.13
Sdc4O35988 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms