Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.93□□□□□ -0.02
Nr1i3O35627 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.93□□□□□ -0.02
Nr1i3O35627 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Gm28630-201ENSMUST00000187806 498 ntBASIC14.93□□□□□ -0.02
Nr1i3O35627 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.93□□□□□ -0.02
Nr1i3O35627 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Mir497b-201ENSMUST00000093601 125 ntBASIC14.93□□□□□ -0.02
Nr1i3O35627 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.93□□□□□ -0.02
Nr1i3O35627 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1i3O35627 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.92□□□□□ -0.02
Nr1i3O35627 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nr1i3O35627 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1i3O35627 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nr1i3O35627 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Nr1i3O35627 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.91□□□□□ -0.02
Nr1i3O35627 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.91□□□□□ -0.02
Nr1i3O35627 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Gm15460-201ENSMUST00000118147 391 ntBASIC14.91□□□□□ -0.02
Nr1i3O35627 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.91□□□□□ -0.02
Nr1i3O35627 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.91□□□□□ -0.02
Nr1i3O35627 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.91□□□□□ -0.02
Nr1i3O35627 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nr1i3O35627 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nr1i3O35627 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.91□□□□□ -0.02
Nr1i3O35627 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nr1i3O35627 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Nr1i3O35627 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.91□□□□□ -0.02
Nr1i3O35627 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1i3O35627 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nr1i3O35627 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nr1i3O35627 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms